Hi all. I have a quick question regarding a warning that I keep getting while running scenic in R. The warning is when I use the : run_SCENIC_2_createRegulons() function.
Warning: There is no annotation version attribute in the input table (it has probably been loaded with an older version of the package).'v9' will be used as it was the old default,but we recommend to re-load the annotations and/or re-run the enrichment to make sure everything is consistent. Preview of motif enrichment saved as: output/Step2_MotifEnrichment_preview.html
Hi all. I have a quick question regarding a warning that I keep getting while running scenic in R. The warning is when I use the : run_SCENIC_2_createRegulons() function.
Warning: There is no annotation version attribute in the input table (it has probably been loaded with an older version of the package).'v9' will be used as it was the old default,but we recommend to re-load the annotations and/or re-run the enrichment to make sure everything is consistent. Preview of motif enrichment saved as: output/Step2_MotifEnrichment_preview.html
I used the "motifAnnotations_mgi_v9" from the RcisTarget package : "1.19.2" and for the rankings the cistarget from : https://resources.aertslab.org/cistarget/databases/old/mus_musculus/mm10/refseq_r80/mc9nr/gene_based/mm10__refseq-r80__500bp_up_and_100bp_down_tss.mc9nr.feather
Is there something I have to change ? Thanks a lot for your help. Best regards, Sanketh