search

aertslab / SCENIC

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
http://scenic.aertslab.org
GNU General Public License v3.0
421 stars 95 forks source link

Error in runGenie #464

Closed arao0912 closed 2 months ago

arao0912 commented 2 months ago

runGenie3(exprMat_filtered, scenicOptions) Using 650 TFs as potential regulators... Running GENIE3 part 1 Error in .GENIE3(exprMatrix = exprMatrix, regulators = regulators, targets = targets, : could not find function ".GENIE3"

I took a look at the source code and cannot seem to find the function .GENIE3 it is referring to within runGenie3. Is there a workaround for this error?

EDIT: Restarted the R session solved this issue.