aertslab / cisTopic

cisTopic: Probabilistic modelling of cis-regulatory topics from single cell epigenomics data
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sha256sum download failed #81

Open Dalhte opened 1 year ago

Dalhte commented 1 year ago

Hello there

I do not succeed to download the sha256sum.txt for mm9

Download sha256sum.txt (with wget or curl):

wget https://resources.aertslab.org/cistarget/databases/sha256sum.txt

curl -O https://resources.aertslab.org/cistarget/databases/sha256sum.txt

Is not working.

Here is what I did : $ feather_database_url='https://resources.aertslab.org/cistarget/databases/old/mus_musculus/mm9/refseq_r70/mc9nr/region_based/mm9-regions-9species.all_regions.mc9nr.feather'

$ feather_database="${feather_database_url##*/}"

$ wget "${feather_database_url}" to download the .feather file, and that seems to work (I got a 134,2 Go file)

then : $ wget https://resources.aertslab.org/cistarget/databases/sha256sum.txt

and got : Will not apply HSTS. The HSTS database must be a regular and non-world-writable file. ERROR: could not open HSTS store at '/home/david/.wget-hsts'. HSTS will be disabled. --2023-07-07 16:16:47-- https://resources.aertslab.org/cistarget/databases/sha256sum.txt Résolution de resources.aertslab.org (resources.aertslab.org)… 134.58.50.9 Connexion à resources.aertslab.org (resources.aertslab.org)|134.58.50.9|:443… connecté. requête HTTP transmise, en attente de la réponse… 404 Not Found 2023-07-07 16:16:47 erreur 404 : Not Found.

Can you help me ?

Best

David

ghuls commented 9 months ago

Each file has its ow sha1sum file now:

wget https://resources.aertslab.org/cistarget/databases/old/mus_musculus/mm9/refseq_r70/mc9nr/region_based/mm9-regions-9species.all_regions.mc9nr.feather.sha1sum.txt

sha1sum -c mm9-regions-9species.all_regions.mc9nr.feather.sha1sum.txt