Hi, I success run the "create_cistarget_motif_databases.py",the output is
Scoring 10249 motifs with Cluster-Buster took: 6763.836560 seconds
Writing cisTarget regions vs motifs scores db: "/mnt/disk1/kxxiao/archr//scenic_analysis/cistarget_database_my/.motifs_vs_regions.scores.feather"
Writing cisTarget regions vs motifs scores db took: 11.126533 seconds
Writing cisTarget motifs vs regions scores db: "/mnt/disk1/kxxiao/archr//scenic_analysis/cistarget_database_my/.regions_vs_motifs.scores.feather"
Writing cisTarget motifs vs regions scores db took: 29.617211 seconds
Creating cisTarget rankings db from cisTarget scores db took: 93.298678 seconds
Writing cisTarget motifs vs regions rankings db: "/mnt/disk1/kxxiao/archr//scenic_analysis/cistarget_database_my/.regions_vs_motifs.rankings.feather"
Writing cisTarget motifs vs regions rankings db took: 17.883978 seconds
but I had checked the path/mnt/disk1/kxxiao/archr//scenic_analysis/cistarget_database_my/,this is no these three files. I don't know what is wrong.
Does anyone can help me ?
please!
@ghuls @tropfenameimer
Hi, I success run the
"create_cistarget_motif_databases.py"
,the output isbut I had checked the path
/mnt/disk1/kxxiao/archr//scenic_analysis/cistarget_database_my/
,this is no these three files. I don't know what is wrong. Does anyone can help me ? please! @ghuls @tropfenameimer