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aertslab / iRegulon

A regulon consists of a transcription factor (TF) and its direct transcriptional targets, which contain common TF binding sites in their cis-regulatory control elements. The iRegulon plugin allows you to identify regulons using motif and track discovery in an existing network or in a set of co-regulated genes.
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whole genome ranking #4

Open rojinsafavi opened 3 years ago

rojinsafavi commented 3 years ago

I was wondering if you could let me know where I can find the whole genome ranking file

"In the ranking step we generate whole-genome rankings of 22284 human RefSeq genes for a library of PWMs where a PWM is a matrix representation of a regulatory motif"

ghuls commented 3 years ago

Whole genome rankings can be found as Feather databases on: https://resources.aertslab.org/cistarget/