aertslab / pycisTopic

pycisTopic is a Python module to simultaneously identify cell states and cis-regulatory topics from single cell epigenomics data.
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Feature request [FEATURE] DARs plotting options: is there a way to generate coverage plots instead of UMAP plots? #175

Open yojetsharma opened 1 month ago

yojetsharma commented 1 month ago

Is your feature request related to a problem? Please describe. I am trying to workaround the idea of creating coverage plots for the DARs generated. Because, UMAP plots only tell us number of cells the region is more accessible in but visualizing the extent to which its opened across clusters would be insightful as is done in Signac. Can someone suggest how we can do this?

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