Singularity cannot install scenicplus.sif, has the container file been deleted?

aertslab / scenicplus

SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.

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Singularity cannot install scenicplus.sif, has the container file been deleted? #187

Closed hgl2017 closed 1 year ago

hgl2017 commented 1 year ago

singularity build scenicplus.sif oci-archive://scenicplus_img.tar

The result of running the script is as follows.


FATAL:   While performing build: conveyor failed to get: error extracting the OCI archive file: open scenicplus_img.tar: no such file or directory```

Why is this so, can you help me answer it? Thanks！

ghuls commented 1 year ago

You have to create the scenicplus_img.tar file first with podman or docker. See: https://github.com/aertslab/scenicplus#creating-a-dockersingularity-image

hgl2017 commented 1 year ago

I see, thank you