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aertslab / scenicplus

SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.
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Question about installation #342

Closed ashleshagogate closed 3 months ago

ashleshagogate commented 3 months ago

Hello, How do I solve this error Screenshot_1

This is what I followed- conda create --name scenicplus python=3.8 conda activate scenicplus pip install MACS2 git clone https://github.com/aertslab/scenicplus cd scenicplus pip install -e .

ashleshagogate commented 3 months ago

I was able to solve it by adding >=0.2.0 next to ctxcore in the requirements.txt file