aertslab / single_cell_toolkit

Tools for correcting single cell barcodes for various scATAC-seq techniques.
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Bugfix and CR update support #4

Closed KrisDavie closed 2 years ago

ghuls commented 2 years ago

Does it still support older versions of CellRanger?

KrisDavie commented 2 years ago

Yes, I added a check for the correct folder structure for both so it should be fine

ghuls commented 2 years ago

@dagousket Maybe you can add support for recent CellRangerATAC/ARC for ATAC like this too.