aezarebski / beasts-castle

This repository contains some helpful scripts for working with BEAST2.
GNU General Public License v3.0
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master should be updated to remaster #12

Closed aezarebski closed 8 months ago

aezarebski commented 1 year ago

https://github.com/aezarebski/beasts-castle/blob/03bcd2849430df791e6996ee40a5a8bfae6ac46e/cogsworth.org?plain=1#L82

The target for master should stay as is, but there should also be a target for basic remaster usage now. It would possibly also be nice to include a basic remaster example in this repo which can be pulled in as part of the setup task

aezarebski commented 1 year ago

The relevant target should look something like this

  <target name="remaster"
      description="Run a remaster simulation: ant remaster -DbeastXMl=sim.xml">
    <exec executable="sh">
      <arg path="lib/beast/bin/beast" />
      <arg line="-seed 1" />
      <arg line="-overwrite" />
      <arg path="${beastXML}" />
    </exec>
  </target>