af-lab histone-catalogue issues

af-lab / histone-catalogue

Core histone catalogue --- Live manuscript

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scons does not recognise option --api-key or --api_key

#52 aflaus closed 1 year ago
1
Bad input data sent to tcoffee

#51 aflaus opened 4 years ago
2
Argument byte v string typing when generating weblogo in scons

#50 aflaus opened 4 years ago
1
Error with empty fetched gene info

#49 aflaus closed 4 years ago
4
Check for epstopdf

#48 aflaus closed 6 years ago
2
Missing Bio/Tools/Phylo/PAML.pm in Ubuntu 18.04

#47 aflaus closed 6 years ago
10
Nomenclature figure examples need italics

#46 aflaus closed 7 years ago
0
Combine literature and table references

#45 aflaus opened 7 years ago
3
broken doi hyperlinks

#44 carandraug closed 7 years ago
1
GM test on Ubuntu 16.04 or 17.04?

#43 aflaus closed 7 years ago
3
regex warning with bp_genbank_ref_extractor

#42 aflaus closed 7 years ago
1
Change title text for compilation date

#41 aflaus closed 5 years ago
1
build fails due to missing lgrenc.def

#40 aflaus closed 7 years ago
2
table of codon usage breaks in half with eLife document class

#39 carandraug closed 7 years ago
1
reference supplementary tables with eLife document class

#38 carandraug closed 7 years ago
1
featurebox from eLife document class does not have page break

#37 carandraug closed 7 years ago
1
build failure with bioperl 1.007001

#36 aflaus closed 7 years ago
3
scons default changed to figures, now requires manuscript target in command line

#35 aflaus closed 8 years ago
1
Latex build errors

#34 aflaus closed 7 years ago
3
Insertion in HIST1H2BA causes mis-numbering of H2B isoforms

#33 aflaus closed 7 years ago
8
HIST2H2AB terminal alignment incorrect

#32 aflaus closed 7 years ago
3
Stem-loop location values

#31 aflaus closed 7 years ago
2
scons fails if no email argument

#30 aflaus closed 8 years ago
4
RefSeq date and version

#29 aflaus closed 7 years ago
8
Add SCons version

#28 aflaus closed 8 years ago
1
Identity value is incorrect in Abstract

#27 aflaus closed 8 years ago
2
some latex computations using wrong value

#26 carandraug closed 8 years ago
1
continuous delivery

#25 carandraug opened 8 years ago
17
table of dn/ds values seem odd

#24 carandraug opened 8 years ago
9
discuss CENP-X as histone variant

#23 carandraug closed 8 years ago
1
missing H1 on several values

#22 carandraug closed 8 years ago
3
unable to handle coding genes with non-coding transcripts

#21 carandraug closed 8 years ago
1
\citet not returning author

#20 aflaus closed 8 years ago
2
Rounding functions not working

#19 aflaus closed 8 years ago
1
Residue numbering disagrees between panels in protein isoform tables

#18 aflaus closed 8 years ago
9
Treatment of genes with multiple transcripts and encoded proteins

#17 aflaus closed 7 years ago
7
Bibliography style to Vancouver numbering system

#16 aflaus closed 8 years ago
5
Citation of editorial item, Error Prone

#15 aflaus closed 8 years ago
2
Stray characters in \HISTOneSpan{} output

#14 aflaus closed 8 years ago
2
RefSeq data obtained timestamp and formatting

#13 aflaus closed 9 years ago
3
Function instead of FP calculation in Abstract

#12 aflaus closed 8 years ago
4
Builds stopped on July 12th

#11 aflaus closed 9 years ago
5
extra comma immedaitely after the HISTnHx in every table legend

#10 carandraug closed 9 years ago
2
move histone table into the main text

#9 carandraug closed 8 years ago
3
Format and Structure fixes

#8 carandraug closed 9 years ago
3
Write an index of all variables and formatted constructs avaialble for insertion.

#7 carandraug closed 9 years ago
1
Table of synonymous and non-synonymous substitutions

#6 carandraug closed 8 years ago
4
Table of codon usage

#5 carandraug closed 8 years ago
2
Output all sequences in fasta for --

#4 carandraug closed 8 years ago
1
Output table of IDs frrom histone-catalogue as files

#3 carandraug closed 8 years ago
7