agordon / fastx_toolkit

FASTA/FASTQ pre-processing programs
Other
167 stars 60 forks source link

Error with fastx make command #13

Closed Prathyusha-konda closed 7 years ago

Prathyusha-konda commented 7 years ago

In file included from seqalign_test.cpp:5:0: ../libfastx/sequence_alignment.h:146:32: error: ‘ssize_t’ does not name a type score_type safe_score ( const ssize_t query_index, const ssize_t target_index) ^ ../libfastx/sequence_alignment.h:146:59: error: ‘ssize_t’ does not name a type score_type safe_score ( const ssize_t query_index, const ssize_t target_index) ^ ../libfastx/sequence_alignment.h:244:37: error: ‘ssize_t’ has not been declared void find_alignment_starting_point(ssize_t &new_query_index, ssize_t &new_targ ^ ../libfastx/sequence_alignment.h:244:63: error: ‘ssize_t’ has not been declared void find_alignment_starting_point(ssize_t &new_query_index, ssize_t &new_targ ^ Makefile:256: recipe for target 'seqalign_test.o' failed make[3]: [seqalign_test.o] Error 1 make[3]: Leaving directory '/media/wkstn/Data/Course/Project/fastx_toolkit-0.0.12/src/seqalign_test' Makefile:252: recipe for target 'all-recursive' failed make[2]: [all-recursive] Error 1 make[2]: Leaving directory '/media/wkstn/Data/Course/Project/fastx_toolkit-0.0.12/src' Makefile:279: recipe for target 'all-recursive' failed make[1]: [all-recursive] Error 1 make[1]: Leaving directory '/media/wkstn/Data/Course/Project/fastx_toolkit-0.0.12' Makefile:209: recipe for target 'all' failed make: [all] Error 2