Enhance the portal to support SKOS - Githubissues

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Enhance the portal to support SKOS #262

Closed syphax-bouazzouni closed 1 year ago

syphax-bouazzouni commented 2 years ago

Requirements :

Schemes part

Todo :

[x] Add skos:ConceptScheme model (+ tests)
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/pull/27
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/81
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/24
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/22
[x] Filter tree view roots by concepts scheme
[x] In the UI tree view add a select field to choose what concepts scheme to show
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/73#event-6438004344
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/72
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/84
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/83
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/43
[x] Extract tree code into a module
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/44
[x] Add SKOS scheme model to the ontologies_api client
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/46
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/49
[x] Fix in UI tree when expanding a concept children getting muted (grey color) by default
[x] https://github.com/ontoportal-lirmm/ontologies_api_ruby_client/issues/6
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/51
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/112
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/113

Collections part

Todo :

[x] Add the skos:Collection class to the model (+ tests)
[x] https://github.com/ontoportal-lirmm/ontologies_api/issues/20
[x] Add the Collection filter to Concepts endpoint (will be the endpoint :collection/members)
[x] Add a tab for Collections in the UI
[x] Add UI to filter concepts by Collection
[x] Add SKOS collection model to the ontologies_api client
[x] In the UI factorize the similar code between schemes, collections and concepts
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/45
[x] Add a filter in the tree view for collections (done with the attribute :isInActiveCollection)
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/98
[x] Add icons in the concepts browsers (a tree icon for the hierarchy, and a list for the list)
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/103
[x] show inCollection when we display=all for a concept
[x] Hande resources that do not have collections
[x] https://github.com/ontoportal-lirmm/ontologies_api_ruby_client/issues/6
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/51
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/112
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/54

SKOS-XL labels part

[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/47
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/48
[x] Add the Labels endpoint (https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/47)
[x] Add a UI component to display Label properties in the details tab especially skosxl:literalForm
[x] Fix a bug in the link buttons (the ontology acronym is duplicated)
[x] https://github.com/ontoportal-lirmm/ontologies_api_ruby_client/issues/6
[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/51
[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/issues/112

Concept date sort

use topConceptOf if no hasTopConcept found

[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/34

Metadata part

[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/33

jonquet commented 2 years ago

Note for later : when working on Collection we nend to remember that there are actually 2 type

jonquet commented 2 years ago

Little addition to this SKOS wish list :

A view to see the "news" based on the concept dates.
A revised SKOS specific metrics in the Summary page.

syphax-bouazzouni commented 1 year ago

For next iterations

[ ] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/33
[ ] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/52
[ ] revised SKOS-specific metrics in the Summary page
[ ] Add the option to choose the Date property to use
[ ] https://github.com/ontoportal-lirmm/ontologies_api/issues/25
[ ] https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/46