agroportal / project-management

Repository used to consolidate documentation about the AgroPortal project and track content related issues.

http://agroportal.lirmm.fr

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Complete and update the Agroportal submission metamodel 2023 - Part 1 #410

Closed syphax-bouazzouni closed 7 months ago

syphax-bouazzouni commented 1 year ago

Goals

Enrich submission attributes metadata
Make the validators less permissive
Keep always the data consistency and coherence

Refrences

Requirements

Goo development

DataTypes

[x] https://github.com/ontoportal-lirmm/goo/pull/23

Validators

YAML Model schemes

[x] https://github.com/ontoportal-lirmm/goo/pull/30

On Update callback

[x] https://github.com/ontoportal-lirmm/goo/pull/31

Ontologies linked to data development

[x] https://github.com/ontoportal-lirmm/ontologies_linked_data/pull/72

API development

UI development

[x] https://github.com/ontoportal-lirmm/bioportal_web_ui/pull/240
[ ] Make a public guide for the portal meta model

jonquet commented 1 year ago

Related to this issue, I realize this is certainly the time to introduce a couple of other properties in the model being candidate at MOD2.1 too.

mod:upperOntology mod:hasFAIRscore mod:crossReference

Metrics (will be necessary for O'FAIRE v2) mod:numberOfReusedTerms mod:numberOfReusedTermsWithMIREOT mod:numberOfMappings mod:numberOfMappingsReusable mod:numberOfCrossReferences mod:numberOfCrossReferencesReusable mod:numberOfObjectsWithLabels mod:numberOfObjectsWithTextDescription mod:numberOfObjectsWithFormalDescription mod:numberOfObjectsWithProvenance

To be completed in @syphax-bouazzouni's metadata document To be completed in MOD2.1 => https://github.com/FAIR-IMPACT/MOD

jonquet commented 7 months ago

New metrics discussion is here : https://github.com/ontoportal-lirmm/ontologies_linked_data/issues/103

mod:upperOntology => not needed as we have mod:specializes