search

aharmer / pathtrackr

An R package for video tracking and analysing animal movement
29 stars 8 forks source link

Unable to install package #35

Closed seroude closed 1 year ago

seroude commented 3 years ago

unable to install even when installing from downloaded .gz package:

install.packages("~/Downloads/pathtrackr-1.2.3.tar.gz", repos = NULL, type = "source") Warning in untar2(tarfile, files, list, exdir, restore_times) : skipping pax global extended headers ERROR: dependencies ‘EBImage’, ‘imager’, ‘viridis’, ‘marmap’, ‘rgdal’, ‘raster’ are not available for package ‘pathtrackr’

  • removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/pathtrackr’ Warning in install.packages : installation of package ‘/Users/seroudel/Downloads/pathtrackr-1.2.3.tar.gz’ had non-zero exit status

the problem is with dependencies, they are not showing in R studio "install packages". Did find a way to get EBImage using:

devtools::install_github("aoles/EBImage")

same problem:

ERROR: dependency ‘locfit’ is not available for package ‘EBImage’

  • removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/EBImage’ Error: Failed to install 'EBImage' from GitHub:

Please aharmer can you help?

orijitghosh commented 2 years ago

Install an older version (from 2020) of locfit, it will be compatible with older R versions. Then you can install EBImage from Bioconductor. I also had the same problem.