How to extract the area matrix?

ahmohamed / lipidr

Data Mining and Analysis of Lipidomics datasets in R

https://www.lipidr.org/

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How to extract the area matrix? #17

Closed githubrudramani closed 3 years ago

githubrudramani commented 3 years ago

Hi there, I am having trouble with extracting the data matrix after doing the analysis. Do you suggest any function (like getAssayData) to get the data? Thank you.

ahmohamed commented 3 years ago

Hi @githubrudramani, LipidomicsExperiment that lipidr uses is a subclass of SummarizedExperiment. You can use assay(data, "Area") to extract the matrix.

ahmohamed commented 3 years ago

Closing the issue. Feel free to open if needed.