I have been having an issue using the "as_lipidomics_experiment" function due to lipid names. Of the 1578 lipids in my data set, only 370 are matched correctly when I check using the "annotate_lipids" function.
Reading responds to other people having this issue, one problem could be I am using an old version of lipid R. Based on a response to an issue last year, it seems lipidr is currently on version 2.4 or higher? If I install it using bioconductor or the suggested devtools command, I get version 2.13 or 2.15 (note: I updated to the latest version of R to make sure this wasn't the issue). To try to get the latest version, I used the following command: devtools::install_github("ahmohamed/lipidr@*release"). However, this only got me to version 2.2. The names issue still persists in this version.
Could you tell me what the current version is? And how I can go about installing it?
I have been having an issue using the "as_lipidomics_experiment" function due to lipid names. Of the 1578 lipids in my data set, only 370 are matched correctly when I check using the "annotate_lipids" function.
Reading responds to other people having this issue, one problem could be I am using an old version of lipid R. Based on a response to an issue last year, it seems lipidr is currently on version 2.4 or higher? If I install it using bioconductor or the suggested devtools command, I get version 2.13 or 2.15 (note: I updated to the latest version of R to make sure this wasn't the issue). To try to get the latest version, I used the following command: devtools::install_github("ahmohamed/lipidr@*release"). However, this only got me to version 2.2. The names issue still persists in this version.
Could you tell me what the current version is? And how I can go about installing it?