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aidenlab / Juicebox

Visualization and analysis software for Hi-C data -
https://aidenlab.org/juicebox
MIT License
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NIH roadmap data in Juicebox #184

Open nchernia opened 8 years ago

nchernia commented 8 years ago

http://egg2.wustl.edu/roadmap/web_portal/

The searchable encode tracks in juicebox are great. Can we add nih roadmap data too? Lots of our cell types in here.

suhas-rao commented 8 years ago

This would be really nice if we could get the roadmap data in juicebox too.

nchernia commented 8 years ago

This is the point of the issue right?

On Tuesday, December 22, 2015, suhas-rao notifications@github.com wrote:

This would be really nice if we could get the roadmap data in juicebox too.

— Reply to this email directly or view it on GitHub https://github.com/theaidenlab/Juicebox/issues/184#issuecomment-166781943 .

Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

suhas-rao commented 8 years ago

yeah sorry, i was just seconding this.

On Tue, Dec 22, 2015 at 6:39 PM nchernia notifications@github.com wrote:

This is the point of the issue right?

On Tuesday, December 22, 2015, suhas-rao notifications@github.com wrote:

This would be really nice if we could get the roadmap data in juicebox too.

— Reply to this email directly or view it on GitHub < https://github.com/theaidenlab/Juicebox/issues/184#issuecomment-166781943> .

Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

— Reply to this email directly or view it on GitHub https://github.com/theaidenlab/Juicebox/issues/184#issuecomment-166790679 .

nchernia commented 8 years ago

It's unlikely to happen before today's release but we'll see.

On Tue, Dec 22, 2015 at 9:46 PM, suhas-rao notifications@github.com wrote:

yeah sorry, i was just seconding this.

On Tue, Dec 22, 2015 at 6:39 PM nchernia notifications@github.com wrote:

This is the point of the issue right?

On Tuesday, December 22, 2015, suhas-rao notifications@github.com wrote:

This would be really nice if we could get the roadmap data in juicebox too.

— Reply to this email directly or view it on GitHub <

https://github.com/theaidenlab/Juicebox/issues/184#issuecomment-166781943>

.

Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

— Reply to this email directly or view it on GitHub < https://github.com/theaidenlab/Juicebox/issues/184#issuecomment-166790679>

.

— Reply to this email directly or view it on GitHub https://github.com/theaidenlab/Juicebox/issues/184#issuecomment-166792402 .

Neva Cherniavsky Durand, Ph.D. Staff Scientist, Aiden Lab www.aidenlab.org

nchernia commented 7 years ago

BUMP.

We need to get some more of ENCODE's tracks into Juicebox. Perhaps a job for a summer student.

sa501428 commented 5 years ago

need to check if ENCODE has all these already