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aidenlab / Juicebox

Visualization and analysis software for Hi-C data -
https://aidenlab.org/juicebox
MIT License
247 stars 58 forks source link

Citation Generator #307

Open theaidenlab opened 8 years ago

theaidenlab commented 8 years ago

Should have a "How to Cite"

The data in the observed map is drawn from 1The data in the control map is drawn from [2] The data was processed by Juicer [3] using the methods developed by Rao & Huntley [4] and were visualized using Juicebox [5]. If you use these maps in publication, please cite: [1] [2] [3] [4] [5]

nchernia commented 8 years ago

For the next version, we should have menu entries under file labelled 'Credits' which is just a credits page for juicebox, and "How to Cite" which should work as I described to Ido today.

Ideally we should see if we can scrape credit info for all tracks we have access to. It would be very handy for users if, once they have made a figure with juicebox, we instantly provided a bibliography.

suhas-rao commented 8 years ago

I think the policy for citing ENCODE data is to cite the main ENCODE consortium paper.

On Thu, Dec 24, 2015 at 6:00 AM nchernia notifications@github.com wrote:

For the next version, we should have menu entries under file labelled 'Credits' which is just a credits page for juicebox, and "How to Cite" which should work as I described to Ido today.

Ideally we should see if we can scrape credit info for all tracks we have access to. It would be very handy for users if, once they have made a figure with juicebox, we instantly provided a bibliography.

— Reply to this email directly or view it on GitHub https://github.com/theaidenlab/JuiceboxDev/issues/307#issuecomment-167115430 .