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aidenlab / juicer

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
http://aidenlab.org
MIT License
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Could not read hic file: No enum constant juicebox.windowui.NormalizationType.SCALE #187

Closed mihuzx closed 2 years ago

mihuzx commented 3 years ago

Hi there,

I converted the validpairs file from hicpro to validpairs.hic for juicerbox, then I wanted to use hiccups call loops, but get this error "Could not read hic file: No enum constant juicebox.windowui.NormalizationType.SCALE"

Thanks for your help. Xuan

sa501428 commented 3 years ago

What version of the juicer tools jar are you using? Also, please use the forum for general questions - aidenlab.org/forum.html

sa501428 commented 2 years ago

Should be resolved in the latest jars.

zzhoujialu commented 1 year ago

Sorry, I am new here...I met the same error. I used the following command and met the foloowing error: java -Djava.awt.headless=true -Xmx16000m -jar /path/to/juicer_tools_1.22.01.jar dump observed KR /path/to/a.hic 1 1 BP 5000 /path/to/a.KRobserved

Exception in thread "main" java.lang.UnsupportedClassVersionError: juicebox/tools/HiCTools : Unsupported major.minor version 52.0 at java.lang.ClassLoader.defineClass1(Native Method) at java.lang.ClassLoader.defineClass(ClassLoader.java:800) at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142) at java.net.URLClassLoader.defineClass(URLClassLoader.java:449) at java.net.URLClassLoader.access$100(URLClassLoader.java:71) at java.net.URLClassLoader$1.run(URLClassLoader.java:361) at java.net.URLClassLoader$1.run(URLClassLoader.java:355) at java.security.AccessController.doPrivileged(Native Method) at java.net.URLClassLoader.findClass(URLClassLoader.java:354) at java.lang.ClassLoader.loadClass(ClassLoader.java:425) at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308) at java.lang.ClassLoader.loadClass(ClassLoader.java:358) at sun.launcher.LauncherHelper.checkAndLoadMain(LauncherHelper.java:482)

Do you have any idea of what could be causing the error? Looking forward to hearing from you. Thanks!