Open sa501428 opened 2 years ago
moshe-olshansky
commented
2 years ago Do you mean that 100000 is represented as 1.0E+5? This also happens in R but there you can discourage such behavior. Possibly there exists an awk flag for this. Does it happen with gawk too?
nchernia
commented
2 years ago You can use printf to avoid this as well.
On Sat, Sep 25, 2021 at 2:17 AM moshe-olshansky @.***> wrote:
Do you mean that 100000 is represented as 1.0E+5? This also happens in R but there you can discourage such behavior. Possibly there exists an awk flag for this. Does it happen with gawk too?
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On certain systems (e.g. Google Colab), awk will round the values of longs / use scientific notation. This results in the index_by_chr script returning an unusable file.