aidenlab / juicer

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
http://aidenlab.org
MIT License
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juicer_tools pre produces empty heatmap #308

Open molikd opened 1 year ago

molikd commented 1 year ago

I'm running a YaHs/Juicer_pre/juicer_tools pre pipeline and it's producing a blank heatmap:

Screenshot 2023-03-02 at 8 45 12 AM

I'm fairly it is at the juicer_tools pre level, as an alternative pipeline (matlock and run-assembly-visualizer.sh) produces a full heatmap.

The only thing I could think of is maybe the chromosome names don't match?