aidenlab / juicer

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
http://aidenlab.org
MIT License
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gzip too slow #316

Open JiantaoZhao426 opened 1 year ago

JiantaoZhao426 commented 1 year ago

When I tried Juicer with a relatively large and complex genome (~3.5 Gb), I found that the step of gzipping the HiC data was quite slow. Is it possible to change the gzip to bgzip -@ with multiple threads for a faster zipping?

All the best,

Jiantao