Too slow to get the inter.hic

aidenlab / juicer

A One-Click System for Analyzing Loop-Resolution Hi-C Experiments

http://aidenlab.org

MIT License

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Too slow to get the inter.hic #354

Open YouxinZhao opened 1 month ago

YouxinZhao commented 1 month ago

I am running the juicer. sh pipeline, but it is too slow to obtain inter.hic. I have spent 20 days and the program is still running. I am not sure if the program is running properly. I have added parallel to the environment variables

YouxinZhao commented 1 month ago

the Genome size is 2.6Gb. The hic data is 400Gb