aidenlab / straw

Extract data quickly from Juicebox via straw
MIT License
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strawR update #107

Open sa501428 opened 2 years ago

sa501428 commented 2 years ago

The C++ and python flavors for straw have been pretty significantly improved/upgraded. It would be great if some of these improvements could also get pulled into the strawR version and CRAN could also be updated.

moshe-olshansky commented 2 years ago

Isn't strawR a wrapper to C++?

sa501428 commented 2 years ago

Yes. So essentially the C++ scripts in the R folder need to get updated. But we've also added persistent data structures, so those may be good to add as well if possible.

On Thu, Mar 17, 2022, 9:29 PM moshe-olshansky @.***> wrote:

Isn't strawR a wrapper to C++?

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cwenger commented 2 years ago

@sa501428 Yes, I'll try to do this at some point!