aidenlab / straw

Extract data quickly from Juicebox via straw
MIT License
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想知道具体参数的上下限,getRecordsAsMatrix和getRecords分别得到什么信息? #130

Open xiangyanghuakai666 opened 8 months ago

xiangyanghuakai666 commented 8 months ago

hic = hicstraw.HiCFile(filepath) hic.getChromosomes() hic.getGenomeID() hic.getResolutions()

mzd = hic.getMatrixZoomData(chrom1, chrom2, data_type, normalization, "BP", resolution)

numpy_matrix = mzd.getRecordsAsMatrix(gr1, gr2, gc1, gc2) records_list = mzd.getRecords(gr1, gr2, gc1, gc2)

这里的gr1, gr2, gc1, gc2可以是0、整条染色体的长度吗?(我输入了:0,248956422,0,248956422,去查看第一条染色体的信息,会报错) getRecordsAsMatrix和getRecords分别得到什么信息?