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aidenlab / straw

Extract data quickly from Juicebox via straw
MIT License
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not enough arguments #74

Open TheCatalyticMicroChip opened 3 years ago

TheCatalyticMicroChip commented 3 years ago

Hi, I am using straw with the following command: ./straw NONE GSE63525_K562_combined_30.hic 22 22 BP 500000 > K562.chHCT116_r22.500 kb.txt I get following error: "not enough arguments"

What could I be missing?

sa501428 commented 3 years ago

We will update the usage. There is a new first parameter before the normalization which should be observed (raw values) or oe (observed/expected values)

On Mon, Jun 7, 2021, 6:29 PM MzwaneleN @.***> wrote:

Hi, I am using straw with the following command: ./straw NONE GSE63525_K562_combined_30.hic 22 22 BP 500000 > K562.chHCT116_r22.500 kb.txt I get following error: "not enough arguments"

What could I be missing?

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TheCatalyticMicroChip commented 3 years ago

Thanks. Can you please let me know here when the usage is updated?

sa501428 commented 3 years ago

what version are you using?

TheCatalyticMicroChip commented 3 years ago

v0.0.8

sa501428 commented 3 years ago

Sorry, I meant is this python, python_pybind, C++, R, Matlab, etc.

On Tue, Jun 8, 2021 at 2:35 PM MzwaneleN @.***> wrote:

v0.0.8

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