Method to share MOCHA Object

[markphillippebworth]

We need a good way to save a MOCHA object with the associated coverage files.

I would propose a function to do this - perhaps something like 'shareMOCHAObject()', which would:

• Save the MOCHA SampleTileObject, and/or tileResults into the MOCHA directory.
• tar or zip that folder up, and then move it to the directory specified within shareMOCHAObject()

shareMOCHAObject <- shareMOCHAObject(SampleTileMatrix = NULL, TileResults = NULL, outPutDirectory = NULL){

Check to make sure that SampleTileMatrix or TileResults are not null.

Save the above object(s) into the directory specific within the SampleTileMatrix/tileResults object.

Tar/Zip the entire folder. If the outPutDirectory is NULL, then leave it in the same directory as the MOCHA folder. If outPutDirectory is specified, move the tar/zip file to the directory specified.

}

[markphillippebworth]

These functions are now apart of MOCHA.