Bug report: Can't operate on closed transaction inside context manager.

Automated report

This issue was created with the app's automated bug reporting feature. Attached to this issue is the full traceback as well as an environment fingerprint that contains information about the operating system as well as all installed libraries.

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Example: I submitted a band structure calculation for Silica.

Attachments

Traceback

```python-traceback /opt/conda/lib/python3.9/site-packages/sqlalchemy/orm/loading.py in load_on_pk_identity(session, statement, primary_key_identity, load_options, refresh_state, with_for_update, only_load_props, identity_token, no_autoflush, bind_arguments, execution_options, require_pk_cols, is_user_refresh) 692 ) 693 result = ( --> 694 session.execute( 695 q, 696 params=params, /opt/conda/lib/python3.9/site-packages/sqlalchemy/orm/session.py in execute(self, statement, params, execution_options, bind_arguments, _parent_execute_state, _add_event) 2360 2361 """ -> 2362 return self._execute_internal( 2363 statement, 2364 params, /opt/conda/lib/python3.9/site-packages/sqlalchemy/orm/session.py in _execute_internal(self, statement, params, execution_options, bind_arguments, _parent_execute_state, _add_event, _scalar_result) 2235 bind = self.get_bind(**bind_arguments) 2236 -> 2237 conn = self._connection_for_bind(bind) 2238 2239 if _scalar_result and not compile_state_cls: /opt/conda/lib/python3.9/site-packages/sqlalchemy/orm/session.py in _connection_for_bind(self, engine, execution_options, **kw) 2099 **kw: Any, 2100 ) -> Connection: -> 2101 TransactionalContext._trans_ctx_check(self) 2102 2103 trans = self._transaction /opt/conda/lib/python3.9/site-packages/sqlalchemy/engine/util.py in _trans_ctx_check(cls, subject) 109 if trans_context: 110 if not trans_context._transaction_is_active(): --> 111 raise exc.InvalidRequestError( 112 "Can't operate on closed transaction inside context " 113 "manager. Please complete the context manager " InvalidRequestError: Can't operate on closed transaction inside context manager. Please complete the context manager before emitting further commands. ```

Environment fingerprint

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By submitting this issue I confirm that I am aware that this information can potentially be used to determine what kind of calculation was performed at the time of error.

aiidalab / aiidalab-qe