code in master branch has __version__ set to 1.1, but pypi version has 1.1.2 - so the repo code does not seem to be identical to the pypi one (was the pypi upload generated from the tidy-up branch?)
README still lists --snps-only instead of --show-indels
a couple of observations for the current version:
__version__
set to 1.1, but pypi version has 1.1.2 - so the repo code does not seem to be identical to the pypi one (was the pypi upload generated from the tidy-up branch?)