search

aineniamh / snipit

snipit: summarise snps relative to your reference sequence
GNU General Public License v3.0
148 stars 28 forks source link

aa merge in #38

Closed aineniamh closed 7 months ago

aineniamh commented 7 months ago

snp_plot It looks great! I've added a warning about assumed sequence type to the qc function, and also suppressed warnings about plotting size.

aineniamh commented 7 months ago

snp_plot And the ambig mode works well too! Just ran the same alignment as above, but in nt mode with ambig on. Doesn't break, and includes characters in the NT_BASES or NT_AMBIG variables.

All looks good to me!