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aineniamh / squirrel

GNU General Public License v3.0
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Assigned reference sequence #22

Closed YangJingqii closed 3 weeks ago

YangJingqii commented 3 weeks ago

Dear,

I'm wondering if I can specify other sequences other than NC_003310 and NC_063383 as reference sequences? Awaiting for your urgent response.

rmcolq commented 3 weeks ago

You can use the --assembly-refs flag to check for calls to reference against

YangJingqii commented 3 weeks ago

You can use the --assembly-refs flag to check for calls to reference against

That helps.Thanks a lot!