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airbnb / knowledge-repo

A next-generation curated knowledge sharing platform for data scientists and other technical professions.
Apache License 2.0
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knowledge_repo add fails: missing template #578

Closed glemarivero closed 4 years ago

glemarivero commented 4 years ago

Python 3.7 Steps to reproduce: pip install --upgrade "knowledge-repo[all]" knowledge_repo --version Local version: 0.8.9 knowledge_repo --repo ./test_repo init knowledge_repo --repo ./test_repo create ipynb example.ipynb knowledge_repo --repo ./test_repo add example.ipynb -p project/example_ipynb

INFO:knowledge_repo.repositories.gitrepository:Fetching updates to the knowledge repository...
Traceback (most recent call last):
  File "/home/tglema/.envs/wrinkles_cnn/bin/knowledge_repo", line 288, in <module>
    kp = knowledge_repo.KnowledgePost.from_file(args.filename, src_paths=args.src)
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/knowledge_repo/post.py", line 489, in from_file
    kp = KnowledgePostConverter.for_file(cls(), filename, format=format, postprocessors=postprocessors, interactive=interactive).from_file(filename, **opts)
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/knowledge_repo/converter.py", line 52, in wrapped
    f(*args, **kwargs)
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/knowledge_repo/converters/ipynb.py", line 69, in from_file
    (body, resources) = md_exporter.from_notebook_node(nb)
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/nbconvert/exporters/templateexporter.py", line 384, in from_notebook_node
    output = self.template.render(nb=nb_copy, resources=resources)
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/jinja2/environment.py", line 1090, in render
    self.environment.handle_exception()
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/jinja2/environment.py", line 832, in handle_exception
    reraise(*rewrite_traceback_stack(source=source))
  File "/home/tglema/.envs/wrinkles_cnn/lib/python3.6/site-packages/jinja2/_compat.py", line 28, in reraise
    raise value.with_traceback(tb)
  File "<template>", line 2, in top-level template code
jinja2.exceptions.TemplateNotFound: markdown.tpl

I've copied a mardown.tpl file to my ~/envs/repo3/lib/python3.7/site-packages/nbconvert/templates/ folder, but I get the same error.

Thanks

npelikan commented 4 years ago

Hi @glemarivero -- I hit the same issue, and from my testing, it appears that you can solve the issue above using:

pip install --upgrade 'nbconvert[execute]<6.0.0'

And try again.

I've submitted a PR to pin to the correct version of nbconvert.