exclude deprecated fields from template

[schristley]

import airr
r = airr.schema.RepertoireSchema.template()
print(json.dumps(r, indent=2))

[snip]
    "age_event": null,
    "age": null,
    "ancestry_population": null,
[snip]

age is deprecated. This should be easy fix.

[javh]

I hit the wrong button and accidentally pushed this fix to master in 9f572ef instead of making a PR. Can you test in master, please?

I now see:

import json
import airr
r = airr.schema.RepertoireSchema.template()
print(json.dumps(r, indent=2))

[snip]
    "age_min": null,
    "age_max": null,
    "age_unit": {
      "id": null,
      "label": null
    },
    "age_event": null,
[snip]

[schristley]

looks good! Generating a template for DataFile is interesting, I like it

[javh]

Oh, I didn't think about trying it on DataFile. That works pretty well!