Reports that don't have sequence_alignments are not generating sequence length histograms. Is that correct? Do you need sequence_alignment to do a sequence length distribution or is sequence sufficient? Not sure, but thought I would ask.
As mentioned in #34 the PDF report has odd tables, lists, and lots of white space, which makes for a not very "pretty" report
As mentioned in the meeting today, a bit more explanation on why each of the reports is relevant for testing a repertoire's credibility would be nice. For the inexperienced user, I might not know why you are showing me productive vs non-productive sequences, sequence length distribution, gene usage, and chimerism stats. What do these tell me about the repertoire?
Overall I think it is looking pretty robust and pretty complete.
A couple of minor suggestions/questions:
sequence_alignmentsare not generating sequence length histograms. Is that correct? Do you needsequence_alignmentto do a sequence length distribution or issequencesufficient? Not sure, but thought I would ask.Overall I think it is looking pretty robust and pretty complete.