AIRR-seq VDJ annotation workflows

[schristley]

Consistent and transparent AIRR-seq annotation pipelines. AIRR-seq data is annotated in a way that is consistent between repositories. The pipeline used is identifiable and reproducible.

• [ ] #53
• [ ] VDJbase allele inference
• [ ] VDJbase genotyping
• [ ] others?

1. Capture how annotation is done (transparency/reproducibility)
2. Annotation pipeline
3. Idenitify data that is suitable for annotation
4. Acquire data that is annotation ready
5. Annotation architecture
6. Annotation automation
7. Consistently annotated data stored
8. Consistently annotated data available to users