Plotting X and Y chromosomes

ait5 / CNApp

CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-friendly interface. The software uses segmented data from either aCGH, SNP-array, whole-exome sequencing or whole-genome sequencing to assess sample profiles and CNA levels, establishing associations with molecular and clinical features. CNApp has three main sections: Re-Seg & Score, Region profile and Classifier model

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Plotting X and Y chromosomes #4

Open chloefeuille opened 1 year ago

chloefeuille commented 1 year ago

Hello, I'm having trouble implementing data with X and Y chrosomes CNAs. I've used either X and Y or 23 and 24 as identifier without any luck. Is it possible to plot data with theses chromosomes?

ait5 commented 1 year ago

Hi,

Sorry, but CNApp does not implement chromosome X and Y analysis at this moment.

Thanks!