I would like to use CaSper in my project but I was faced with the question Can CaSpER be used on data generated from a 3'- tag sequencing protocol like Chromium from 10x Genomics? are there any differences regarding the results between data generated from a whole length RNA sequencing protocol and 3'- tag sequencing protocol?
Hello, thank you for developing this package.
I would like to use CaSper in my project but I was faced with the question Can CaSpER be used on data generated from a 3'- tag sequencing protocol like Chromium from 10x Genomics? are there any differences regarding the results between data generated from a whole length RNA sequencing protocol and 3'- tag sequencing protocol?
I would appreciate any help