search

akikuno / DAJIN

One-step genotyping software using a long-read sequencer
https://doi.org/10.1371/journal.pbio.3001507
Other
5 stars 2 forks source link

HDBSCAN memory leak #19

Closed akikuno closed 3 years ago

akikuno commented 3 years ago

HDBSCAN in clustering.R requires a full of RAM. HDBSCAN's memory option by Python is probably a good solution. https://hdbscan.readthedocs.io/en/latest/api.html

Test sample:

akikuno commented 3 years ago

I implemented python's HDBSCAN. No memory leak confirmed.