Input from Guppy's demultiplexing

akikuno / DAJIN

One-step genotyping software using a long-read sequencer

https://doi.org/10.1371/journal.pbio.3001507

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Input from Guppy's demultiplexing #35

Closed akikuno closed 2 years ago

akikuno commented 3 years ago

Since qcat will be deprecated, we will use Guppy for the demultiplexing. The output is different from qcat and Guppy. (The output of Guppy's demultiplexing is a directory including fastq files.)

akikuno commented 3 years ago

I am updating DAJIN to accept the output FASTQ from guppy_basecaller in develop branch. It will be merged to master branch.

寿司ゆき:yes

akikuno commented 2 years ago

If you prepare merged fastq file (one fastq file / sample), DAJIN works well.