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akikuno / DAJIN2

🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
MIT License
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Add VCF reports #32

Open akikuno opened 1 month ago

akikuno commented 1 month ago

Is your feature request related to a problem? Please describe.

Consensus sequence is now represented as HTML and FASTA. Using my cstag package, it is possible to output in VCF format.

https://github.com/akikuno/cstag

Describe the solution you'd like

Use the cstag.to_vcf function.

Describe alternatives you've considered if you have any

None

Additional context

None