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akikuno / DAJIN2

🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
MIT License
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Test with Python 3.11 and 3.12 #43

Closed akikuno closed 2 months ago

akikuno commented 3 months ago

📋 Description

The pysam and mappy builds with Python 3.11 and 3.12 seem to be released in BioConda.

image

Thus, it needs to test DAJIN2 with Py 3.11 and 3.12.

🔍 Environment

- OS: WSL (Ubuntu 22.04)
- DAJIN2: 0.5.1

Anything else?

No response

akikuno commented 3 months ago

Pysam: https://anaconda.org/bioconda/pysam/files Mappy: https://anaconda.org/bioconda/mappy/files

akikuno commented 3 months ago

DAJIN2 v0.5.2 works Py 3.11 and 3.12🎊

https://github.com/akikuno/DAJIN2/actions/runs/9574795383