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akikuno / DAJIN2

🔬 Genotyping tool for genome-edited samples, utilizing nanopore sequencer target sequencing
MIT License
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Replace `midsv` to `csvtag` #54

Open akikuno opened 4 months ago

akikuno commented 4 months ago

📋 Description

Currently, we are using CSSPLIT from the midsv package. However, since CSSPLIT was developed as an accessory to the midsv package, there are no tools available for operating CSSPLIT, and the processing is handled internally within DAJIN2.

Therefore, we are now developing csvtag (not publicly opened yet) as a replacement for CSSPLIT. We would like to transition from midsv/CSSPLIT to csvtag.

🔍 Environment

DAJIN2 version: 0.5.4

📎 Anything else?

No response

akikuno commented 3 months ago

csvtag is now publically open, but still developmental stage. https://github.com/akikuno/csvtag