I have a multi-layered TIFF which I generated from a multi-channel fluorescence image. I also have the corresponding RGB/flattened/composite image. I wish to make a spatial distance map with phenoptrReports. The Spatial Map Viewer can locate the file, but throws this error. Any suggestion?
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Warning: Removed 1 rows containing missing values (geom_segment).
Warning: Removed 1 rows containing missing values (geom_text).
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Warning: Removed 1 rows containing missing values (geom_segment).
Warning: Removed 1 rows containing missing values (geom_text).
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Warning in min(x) : no non-missing arguments to min; returning Inf
Warning in max(x) : no non-missing arguments to max; returning -Inf
Warning: Error in grid.Call.graphics: non-finite location and/or size for viewport
178: recordGraphics
177: grid.draw.gTree
175: print.ggplot
167: func
165: f
164: Reduce
155: do
154: hybrid_chain
126: drawPlot
112:
96: drawReactive
83: renderFunc
82: output$plot
2: shiny::runApp
1: phenoptrReports::spatial_map_viewer
The spatial map viewer relies on spatial reference information in the component data files written by inForm. Your TIFF file probably does not include this.
I have a multi-layered TIFF which I generated from a multi-channel fluorescence image. I also have the corresponding RGB/flattened/composite image. I wish to make a spatial distance map with phenoptrReports. The Spatial Map Viewer can locate the file, but throws this error. Any suggestion?
Warning in min(x) : no non-missing arguments to min; returning Inf Warning in max(x) : no non-missing arguments to max; returning -Inf Warning in min(x) : no non-missing arguments to min; returning Inf Warning in max(x) : no non-missing arguments to max; returning -Inf Warning: Removed 1 rows containing missing values (geom_segment). Warning: Removed 1 rows containing missing values (geom_text). Warning in min(x) : no non-missing arguments to min; returning Inf Warning in max(x) : no non-missing arguments to max; returning -Inf Warning in min(x) : no non-missing arguments to min; returning Inf Warning in max(x) : no non-missing arguments to max; returning -Inf Warning: Removed 1 rows containing missing values (geom_segment). Warning: Removed 1 rows containing missing values (geom_text). Warning in min(x) : no non-missing arguments to min; returning Inf Warning in max(x) : no non-missing arguments to max; returning -Inf Warning in min(x) : no non-missing arguments to min; returning Inf Warning in max(x) : no non-missing arguments to max; returning -Inf Warning: Error in grid.Call.graphics: non-finite location and/or size for viewport 178: recordGraphics 177: grid.draw.gTree 175: print.ggplot 167: func 165: f 164: Reduce 155: do 154: hybrid_chain 126: drawPlot 112:
96: drawReactive
83: renderFunc
82: output$plot
2: shiny::runApp
1: phenoptrReports::spatial_map_viewer