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akoyabio / phenoptrReports

Create analysis reports from inForm data.
https://akoyabio.github.io/phenoptrReports
zlib License
15 stars 7 forks source link

Consolidated and Summary Report- Warning #53

Closed SDJ7007 closed 3 years ago

SDJ7007 commented 3 years ago

Hello, I am using phenoptr for my analysis and receiving this warning while the consolidation is occuring:

Warning: The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "", and the latter is "Cell seg data summary". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check. Joining, by = "Slide ID" Joining, by = "Slide ID" Quitting from lines 168-190 (Cell_seg_summary_report.Rmd)

Please do help me. Thank you. Regards, Shweta Johari

AB-Kent commented 3 years ago

Please update to the latest phenoptr and phenoptrReports.

SDJ7007 commented 3 years ago

Thank you. Yes I did this, I got into another error of not having both the HTML files of the projects but just one.

SDJ7007 commented 3 years ago

When I updated the R to 4.1, it did not read my one project.