One project is gettting consolidated but not the second.

[SDJ7007]

Good evening, I have two projects and want to consolidate and summarize both but I am only getting the summary data of one.

Listening on http://127.0.0.1:4996 Reading "Merge_cell_seg_data". Data is already in microns, no conversion performed
Adding Slide ID column to Merge_cell_seg_data.txt Writing report for "Merge_cell_seg_data". Quitting from lines 174-196 (Cell_seg_summary_report.Rmd) Unable to write summary report All renaming inputs must be named. Writing consolidated data. Writing report for consolidated data.
Quitting from lines 174-196 (Cell_seg_summary_report.Rmd) Unable to write summary report All renaming inputs must be named. Done!

In addition, the consolidated and summarized data of another when I put it in the analyze consolidated adding, it is showing as please input data.

May I please know what I am doing wrong? What can be done?

Thank you -Shweta Johari

[SDJ7007]

Sir, Thank you for your patience and for closing the issue on that platform. Could I please know why am I receiving only one output (no consolidation of both projects but only one HTML summary of one project) and how can I overcome it, please? Thank you.

Yours sincerely, Shweta Johari

[AB-Kent]

The problem is that you have a space in one of the phenotype names - "F4/80 +". This is interpreted as two phenotypes and causes the problem you see.