Support for torch-CPU - Githubissues

While using it on a Nvidia-activated Linux machine, it runs well. However, the program outputs an error on CUDA when running it on a laptop

Here is the specifications for my machine, and the error log is below

seq_name:test
seq_len:72
current processing 1/1
All_file_list:1
Save RNA test data to data/test.pick
Traceback (most recent call last):
  File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/bin/redfold", line 8, in <module>
    sys.exit(main())
  File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/lib/python3.10/site-packages/redfold/__main__.py", line 16, in main
    test_data(args,file2)
  File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/lib/python3.10/site-packages/redfold/test_data.py", line 130, in test_data
    loss_weight= torch.Tensor([300]).cuda()
  File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/lib/python3.10/site-packages/torch/cuda/__init__.py", line 221, in _lazy_init
    raise AssertionError("Torch not compiled with CUDA enabled")
AssertionError: Torch not compiled with CUDA enabled

Thanks in advance!

Hello Juyoung Shin, It seems that the problem might be related to CUDA regarding the issue you encountered while using REDfold on macOS. REDfold requires torch (version 1.9 or higher) with cu111 support.

Regards, Aky

Juyoung Shin @.***> 於 2023年5月3日週三下午4:28寫道：

While using it on a Nvidia-activated Linux machine, it runs well. However, the program outputs an error on CUDA when running it on a laptop

[image: Screenshot 2023-05-03 at 17 26 48] https://user-images.githubusercontent.com/54666446/235866454-8d9b8e81-e672-45ee-8b2f-300300d92960.png Here is the specifications for my machine, and the error log is below

seq_name:test seq_len:72 current processing 1/1 All_file_list:1 Save RNA test data to data/test.pick Traceback (most recent call last): File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/bin/redfold", line 8, in sys.exit(main()) File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/lib/python3.10/site-packages/redfold/main.py", line 16, in main test_data(args,file2) File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/lib/python3.10/site-packages/redfold/test_data.py", line 130, in test_data loss_weight= torch.Tensor([300]).cuda() File "/Users/juyoungshin/Documents/code_repo/REDfold/.conda/lib/python3.10/site-packages/torch/cuda/init.py", line 221, in _lazy_init raise AssertionError("Torch not compiled with CUDA enabled") AssertionError: Torch not compiled with CUDA enabled

Thanks in advance!

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-- Best Aky

aky3100 / REDfold

Support for torch-CPU #2