al-mcintyre / mCaller

A python program to call methylation (m6A in DNA) from nanopore signal data
MIT License
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Problems about run of Test Data #10

Closed OliverG74 closed 5 years ago

OliverG74 commented 5 years ago

Dear authors, when we run the command line:

./make_bed.py -f testdata/masonread1.eventalign.diffs.6 -d 1 -m 0.5

the error says that programm 'make_bed.py' cannot recognize the argument "-m 0.5" we don't understand why '-m 0.5' cannot be recognized as an argument when running this file.

al-mcintyre commented 5 years ago

Sorry please try with the updated flag for the modification threshold -t 0.5. I will update the README