Closed ANGEL-D-SAMUEL closed 1 year ago
HI @ANGEL-D-SAMUEL ,
This is not how to use the pipeline argument. The use of the pipeline is clearly explained in the help of methRead function (see help(methRead)
or ?methRead
). You may check the examples section of the help to learn how you can read that generic file as a methylKit object.
See here for an example.
Best, Alex
I am trying to use BedGraph file format as an input for the methylkit() using methRead() function. However, i am getting error? Is thi how we give 'pipeline' or do i need to change it ?
if i am using 'read.table' function
This works for me