[epic] Collect simulation data

[mastoffel]

A wide variety of simulations will help to test the package.

• [x] tsunami simulations
• [x] cardiovascular simulations
• [ ] engineering simulations
• [ ] ice sheet simulations
• [ ] infrastructure
• [x] other interesting simulations edit: Added to #71

[mastoffel]

Few notes on the cardiovascular simulation data after talking to Marina: Easy datasets (fewer parameters, usually LHS sampled):

• atrial_cell_model / ionic
• circadapt
• passive_mechanics
• tiossue_elecrophysiology

Difficult datasets (many parameters, non-linear, non-smooth, non-LHS):

• atrial_cell_model (other than ionic)
• four chamber datasets (very difficult)

[kallewesterling]

@mastoffel - should the following from @zackxconti on Slack be added to this issue?

1. "a dataset (996 dat points, input space is pseudo-randomly sampled) from the finite element analysis (frame) of a very simple cantilever beam where span of the beam, and it's cross-sectional depth are the inputs while maximum deflection and weight are the targets/outputs."
2. "a more intricate cantilever truss design example whose geometry is parameterised by a set of geometric variables. In this dataset, deflection and weight are the targets/outputs while the remaining variables are inputs, controlling the geometry. The folder contains simulated data of the same problem for multiple dataset sizes."

[mastoffel]

yes, thanks for adding this @kallewesterling and @zackxconti for providing the data!

[mastoffel]

Also adding this repo for high dimensional datasets.

[kallewesterling]

@mastoffel This is where we're waiting for a dataset from BAS? We might want to add that as an issue here to make sure it's on the roadmap.

[mastoffel]

@mastoffel This is where we're waiting for a dataset from BAS? We might want to add that as an issue here to make sure it's on the roadmap.

Yes, still waiting for the BAS dataset.

[kallewesterling]

Could you tell me something more about what the "infrastructure" dataset would be above?

As for "other interesting simulations", I think this might be something we can add to #71 as part of how folks can contribute to the package?

[mastoffel]

Could you tell me something more about what the "infrastructure" dataset would be above?

I'm not sure tbh, this should be something from the DT-TRIC infrastructure side, but I haven't found any good datasets here, but will talk to Keith again at some point.

[kallewesterling]

What would a "good dataset" mean? I will poke around as well!

[mastoffel]

What would a "good dataset" mean? I will poke around as well!

Simulation input/output for a simulation that's interesting or useful to emulate. Basically a potential use case for autoemulate. Optimally, these will have simple scalar inputs and outputs, rather than a mesh or something more complicated.